Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007197.1 Hibiscus syriacus cultivar Beakdansim tig00018976_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58793

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1880--2254
125
3.0
125
97
0
698
31
20
24
23
1.98
2678--2779
47
2.1
49
87
8
149
63
0
7
28
1.22
2742--2853
36
3.1
36
77
13
113
62
0
9
27
1.27
4107--4229
10
12.2
10
69
19
60
65
1
1
30
1.11
4107--4164
19
3.0
20
80
12
59
72
1
0
25
0.94
4107--4147
9
4.4
9
84
6
55
75
0
0
24
0.80
4176--4242
12
5.4
13
79
12
54
58
2
2
35
1.29
4123--4247
30
4.2
29
76
16
107
61
2
1
34
1.18
4155--4247
25
3.6
24
75
12
78
59
2
2
36
1.22
4318--4554
37
6.5
35
79
10
203
41
8
5
44
1.59
4319--4554
72
3.2
71
78
10
201
41
8
5
44
1.59
4318--4567
112
2.3
110
82
9
298
41
8
5
44
1.59
4888--4913
7
3.7
7
100
0
52
26
0
0
73
0.84
7106--7172
12
5.5
12
70
1
53
61
1
0
37
1.05
7263--7294
2
16.0
2
93
0
55
46
0
0
53
1.00
8543--8594
3
17.0
3
88
4
77
63
0
3
32
1.12
8963--9400
123
3.6
123
92
1
684
26
18
14
41
1.88
9862--9909
22
2.4
18
73
23
51
35
12
14
37
1.84
9798--9904
22
4.9
22
93
2
162
34
14
14
36
1.87
11258--11297
20
2.0
21
85
5
55
25
17
5
52
1.64
18555--18586
16
2.1
16
88
11
50
31
6
12
50
1.65
18627--18658
15
2.1
15
94
0
55
53
6
15
25
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22195--22230
17
2.1
18
89
5
56
44
0
0
55
0.99
23813--23883
3
24.0
3
91
8
119
69
0
0
30
0.89
27908--27933
5
5.2
5
100
0
52
0
19
57
23
1.40
28018--28101
34
2.5
34
96
1
152
40
0
0
59
0.97
31963--32173
41
5.2
41
81
4
212
28
18
17
36
1.93
35635--35742
38
2.7
42
78
8
127
36
17
15
30
1.91
36174--36211
19
2.0
20
85
15
53
28
5
7
57
1.49
36791--36826
18
1.9
19
88
5
56
63
5
0
30
1.17
38540--38613
28
2.7
28
80
2
78
54
5
4
36
1.43
45315--45352
18
2.1
18
100
0
76
15
47
21
15
1.82
48591--48653
23
2.8
22
80
7
72
20
31
19
28
1.97
53578--53646
36
1.9
36
88
2
104
24
8
14
52
1.70
54419--54457
20
2.0
20
94
0
69
64
5
7
23
1.40
56073--56119
24
2.0
25
84
12
64
44
19
17
19
1.87

Tables:   1

The End!