Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007199.1 Hibiscus syriacus cultivar Beakdansim tig00018993_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46562

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10555--10810
137
1.9
138
92
0
433
39
17
14
27
1.89
17444--17513
19
3.7
19
98
0
131
21
25
31
21
1.98
17482--17659
64
2.8
63
82
8
207
30
17
23
28
1.97
20316--20375
23
2.6
23
94
0
102
21
20
30
28
1.98
26133--26324
93
2.1
93
96
0
357
28
19
23
29
1.98
26316--26477
64
2.5
64
81
2
182
29
15
23
32
1.95
26885--26919
18
1.9
18
88
0
52
25
14
40
20
1.90
27207--27255
17
2.9
17
90
0
80
32
20
22
24
1.98
29372--29417
19
2.4
19
100
0
92
43
15
15
26
1.85
30188--30241
28
2.0
27
82
7
65
31
7
9
51
1.61
41206--41233
2
14.0
2
100
0
56
50
0
0
50
1.00
45993--46059
28
2.4
28
82
0
80
49
17
4
28
1.66
46142--46178
19
1.9
19
94
0
65
13
16
0
70
1.17

Tables:   1

The End!