Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000720.1 Hibiscus syriacus cultivar Beakdansim tig00001398_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72114

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2413--2452
21
2.0
20
85
5
53
35
0
7
57
1.27
13174--13216
2
21.0
2
90
4
68
48
2
2
46
1.27
13670--13730
23
2.7
21
78
14
68
70
8
4
16
1.29
16611--16644
17
1.9
18
88
5
52
29
0
5
64
1.17
20870--20916
22
2.1
22
100
0
94
46
12
4
36
1.62
22063--22721
182
3.6
182
89
2
977
42
13
17
27
1.86
22063--22721
363
1.8
363
88
4
1006
42
13
17
27
1.86
24683--24733
24
2.2
24
86
6
70
45
1
7
45
1.44
25182--25248
33
2.0
33
100
0
134
28
0
47
23
1.52
25432--25470
18
2.2
18
85
0
51
58
0
30
10
1.31
25638--25664
13
2.1
13
100
0
54
29
22
25
22
1.99
27015--27063
19
2.6
19
96
0
89
32
2
10
55
1.45
27512--28677
201
5.8
201
90
2
1689
37
14
15
33
1.88
29314--29343
2
15.0
2
100
0
60
50
0
0
50
1.00
31445--31491
6
7.8
6
85
0
58
34
2
14
48
1.56
31445--31495
18
2.8
18
84
0
66
35
3
13
47
1.62
32225--33614
200
7.0
200
87
2
1879
38
13
16
32
1.87
35166--35213
19
2.5
19
96
0
87
33
4
8
54
1.50
37946--38419
200
2.4
199
81
5
532
40
15
13
30
1.86
38446--38493
23
2.1
23
88
0
69
37
16
6
39
1.74
39159--39202
22
2.0
22
81
0
52
29
2
22
45
1.65
40860--40909
15
3.4
15
71
15
50
56
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40868--40928
29
2.1
29
96
0
113
55
1
0
42
1.09
41070--41112
22
2.0
22
90
4
70
58
2
0
39
1.11
41077--41138
22
3.3
19
78
17
58
50
0
0
50
1.00
44514--44620
34
3.1
34
87
0
151
36
2
4
56
1.35
45144--45213
21
3.3
20
90
5
95
18
27
35
18
1.94
45233--45285
21
2.5
21
90
0
88
20
5
45
28
1.74
46979--47061
33
2.5
32
83
13
89
56
2
0
40
1.12
47537--47567
2
15.5
2
100
0
62
51
0
0
48
1.00
47781--47978
87
2.3
87
89
0
297
47
10
8
33
1.67
49450--49497
25
1.9
25
82
0
60
41
0
6
52
1.27
50055--50583
109
4.8
111
86
1
690
45
10
11
32
1.74
50055--50584
220
2.4
222
88
1
755
45
10
11
32
1.74
51043--51389
110
3.1
111
92
1
554
42
11
12
33
1.79
51351--51398
20
2.4
19
76
10
51
37
4
12
45
1.61
51820--52156
109
3.1
110
84
5
436
43
11
12
32
1.77
51820--52156
110
3.1
109
85
4
434
43
11
12
32
1.77
53250--53308
31
2.0
30
90
6
93
57
5
11
25
1.54
53519--53578
20
3.0
20
74
13
61
56
1
0
41
1.09
53538--53597
30
2.0
29
87
3
84
55
3
0
41
1.16
53583--53626
23
2.0
22
86
4
61
54
9
0
36
1.32

Tables:   1

The End!