Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007202.1 Hibiscus syriacus cultivar Beakdansim tig00019018_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43947

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3958--4010
14
3.5
15
78
21
58
66
1
5
26
1.25
6855--6981
41
3.2
40
79
10
145
37
20
15
25
1.92
12292--12330
20
2.0
20
84
0
51
23
5
23
48
1.70
12504--12564
20
2.9
21
85
7
70
19
26
34
19
1.96
19629--19844
76
2.9
76
90
4
314
27
1
12
58
1.43
20420--20469
13
3.6
13
82
12
55
28
2
0
70
0.99
24648--24687
21
1.9
21
90
10
64
47
12
5
35
1.63
25424--25450
2
13.5
2
100
0
54
51
0
0
48
1.00
34844--34882
13
3.1
13
85
14
55
56
0
10
33
1.33
35150--35227
21
3.7
21
73
0
66
29
14
15
41
1.86
36833--36893
13
4.7
13
93
0
95
32
21
13
32
1.91
36872--37037
85
2.0
85
80
4
192
30
18
18
32
1.95

Tables:   1

The End!