Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007204.1 Hibiscus syriacus cultivar Beakdansim tig00019022_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64636

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
780--839
30
2.0
31
83
3
77
55
10
6
28
1.58
6557--6602
20
2.3
20
88
3
67
36
26
0
36
1.57
8038--8072
9
3.7
9
85
14
52
51
2
2
42
1.31
12187--12289
36
2.9
36
81
5
127
50
21
7
20
1.73
21010--21108
49
2.0
49
98
0
189
24
17
15
43
1.87
21847--22912
540
2.0
540
98
0
2060
26
23
15
34
1.94
24402--24473
30
2.4
30
80
11
76
5
8
23
62
1.45
31685--31768
36
2.3
36
87
4
116
20
26
25
28
1.99
42190--42244
25
2.2
25
96
0
101
27
9
23
40
1.85
42809--42854
21
2.1
22
92
4
76
41
4
13
41
1.63
42810--42885
17
4.2
17
78
10
71
43
6
11
38
1.68
42814--42860
21
2.2
20
85
10
67
44
4
10
40
1.59
42839--42884
18
2.6
19
83
13
62
45
8
8
36
1.66
44046--44098
21
2.8
19
76
15
56
16
28
1
52
1.54
47266--47486
112
2.0
112
85
6
306
29
14
18
37
1.91
54241--54466
111
2.1
108
84
4
292
31
14
17
36
1.90
59283--59663
137
2.8
138
84
2
469
26
14
29
28
1.96
59547--59734
83
2.3
83
87
0
277
26
15
30
27
1.96
59552--59693
43
3.4
43
68
23
120
26
16
28
27
1.97
59828--59958
68
1.9
69
81
7
160
39
11
17
31
1.85
59890--59970
36
2.3
36
80
6
94
35
12
12
39
1.81
60736--60791
27
2.1
27
96
0
103
17
28
30
23
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60987--61013
3
9.0
3
100
0
54
66
0
0
33
0.92
62382--62439
29
2.0
29
96
0
107
32
10
8
48
1.68
62757--62799
15
2.9
14
80
10
50
39
6
2
51
1.42
63557--63596
21
2.0
20
90
5
62
5
62
10
22
1.46

Tables:   1

The End!