Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007207.1 Hibiscus syriacus cultivar Beakdansim tig00019044_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94614

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7179--7276
45
2.1
46
86
3
135
35
17
12
34
1.87
9871--9925
27
2.0
27
86
10
76
36
3
0
60
1.15
10368--10413
10
4.3
10
82
15
56
2
10
19
67
1.31
10376--10425
23
2.2
23
82
7
57
2
10
26
62
1.38
13035--14316
642
2.0
642
96
0
2368
28
24
16
30
1.96
31255--31315
21
3.2
21
65
29
64
31
4
21
42
1.74
31248--31355
35
3.0
36
90
5
164
31
3
19
45
1.68
31750--31784
17
2.0
17
88
5
52
48
0
2
48
1.16
32027--32196
74
2.3
74
89
2
250
38
16
8
36
1.79
42130--42268
8
17.7
7
96
1
134
48
0
0
51
1.00
42130--42253
2
62.5
2
98
1
241
49
0
0
50
1.00
42132--42276
18
8.3
16
95
3
103
46
0
1
51
1.09
47691--47811
64
1.9
64
86
3
172
34
19
18
27
1.95
47691--47853
64
2.5
64
81
7
170
33
19
18
28
1.96
48425--48497
18
3.9
18
82
7
101
20
20
30
28
1.98
48425--48498
38
1.9
38
91
0
121
21
20
29
28
1.98
50843--50885
21
2.0
21
86
0
59
30
27
25
16
1.97
50912--50949
20
1.9
20
88
0
58
23
34
31
10
1.89
51580--51624
23
2.0
23
86
0
63
20
26
26
26
1.99
57660--57702
21
2.0
21
86
0
59
30
27
25
16
1.97
58396--58440
23
2.0
23
86
0
63
20
26
26
26
1.99
59206--59246
6
6.8
6
91
0
64
36
2
48
12
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59206--59250
18
2.5
18
88
0
72
40
2
46
11
1.52
60354--60394
13
3.2
13
93
3
66
29
7
14
48
1.71
62945--63084
64
2.2
64
79
5
149
35
20
15
28
1.94
63656--63726
18
3.8
18
80
7
79
19
21
28
30
1.97
70845--70869
2
12.5
2
100
0
50
48
0
0
52
1.00
87672--87733
31
2.0
31
100
0
124
41
9
9
38
1.71

Tables:   1

The End!