Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007210.1 Hibiscus syriacus cultivar Beakdansim tig00019059_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54558

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11663--11724
27
2.2
28
80
8
74
51
17
14
16
1.76
12750--12779
3
10.0
3
100
0
60
33
0
0
66
0.92
14503--14535
17
2.1
17
88
11
52
63
3
0
33
1.10
18212--18252
2
20.5
2
100
0
82
51
0
0
48
1.00
23902--23983
29
2.8
29
94
1
137
32
14
9
42
1.79
28667--28748
29
2.8
29
94
1
137
32
14
9
42
1.79
30247--30423
90
2.0
89
93
1
300
39
11
4
44
1.61
32679--32888
65
3.2
64
75
12
196
26
17
23
32
1.97
33344--33388
2
23.0
2
95
4
83
48
0
0
51
1.00
41448--41636
64
3.0
64
80
10
217
26
17
23
31
1.97

Tables:   1

The End!