Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007213.1 Hibiscus syriacus cultivar Beakdansim tig00019067_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66378

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276--329
20
2.7
20
97
0
99
25
18
24
31
1.97
236--350
61
1.9
61
81
3
142
21
20
23
34
1.96
1677--1731
2
27.5
2
100
0
110
49
0
0
50
1.00
6706--6747
17
2.4
18
92
4
68
16
47
23
11
1.80
6761--6935
29
6.1
29
78
7
171
37
4
18
40
1.70
6748--6937
58
3.3
56
78
9
197
36
4
18
40
1.71
10211--10270
28
2.1
29
93
3
104
46
8
3
41
1.50
10218--10273
14
3.9
14
75
11
51
48
10
1
39
1.49
14699--14755
22
2.7
21
83
5
71
31
24
17
26
1.97
20524--20628
22
4.8
23
83
10
139
26
26
19
27
1.99
20524--20626
44
2.4
44
91
4
165
27
26
19
27
1.99
22594--22642
21
2.3
21
86
10
64
16
2
26
55
1.52
22965--23013
12
4.2
12
81
5
64
36
8
8
46
1.63
23388--23467
22
3.8
21
75
15
76
27
28
18
25
1.98
26937--26975
14
2.7
14
84
4
51
46
0
51
2
1.14
26943--26998
22
2.5
22
94
0
94
41
0
55
3
1.17
27040--27089
21
2.4
21
80
6
57
42
0
0
58
0.98
40141--40174
17
2.0
17
88
0
50
38
8
11
41
1.73
40589--40643
13
4.2
13
75
13
58
49
12
3
34
1.59
40629--40727
33
3.0
33
94
1
164
45
15
7
32
1.73
40722--40761
21
1.9
21
94
0
71
47
7
15
30
1.72
49885--49935
19
2.7
19
90
0
75
27
25
19
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50243--50291
22
2.2
23
82
10
57
36
18
2
42
1.62
56119--56190
18
3.8
18
85
10
99
27
33
19
19
1.96
56133--56195
21
3.1
21
84
13
96
28
28
19
23
1.98
56114--56195
39
2.1
39
93
0
137
29
29
18
23
1.97
60065--60187
43
2.9
43
87
0
174
21
4
21
52
1.63
60329--60373
21
2.1
21
91
0
72
37
20
28
13
1.90
60354--60439
34
2.4
36
86
5
113
36
17
23
23
1.95
62546--62584
16
2.4
16
91
0
60
71
0
5
23
1.05
62873--62919
16
2.8
17
80
6
51
63
0
0
36
0.94
64151--64208
2
30.5
2
81
10
68
43
3
0
53
1.17
65546--65590
21
2.1
22
95
4
83
42
20
28
8
1.82

Tables:   1

The End!