Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007215.1 Hibiscus syriacus cultivar Beakdansim tig00019079_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49116

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8490--8539
3
16.7
3
87
8
75
62
2
36
0
1.07
11532--11602
36
2.0
36
85
0
97
45
9
18
26
1.81
12103--12138
17
2.1
17
94
0
63
44
11
13
30
1.79
29879--29937
3
19.7
3
96
0
109
32
0
1
66
1.02
30334--30803
138
3.4
138
82
5
538
46
12
12
27
1.78
31149--31247
2
48.5
2
86
7
137
46
1
5
47
1.31
32883--32948
22
3.2
21
71
20
68
10
19
13
56
1.67
32865--32998
39
3.5
39
85
5
168
17
19
11
51
1.75
32942--33002
18
3.1
21
65
15
58
19
19
6
54
1.66
33232--33289
25
2.3
25
93
0
98
29
24
1
44
1.63
35043--35100
23
2.7
23
81
7
68
17
32
13
36
1.89
36508--36581
6
12.7
6
78
13
75
4
12
1
82
0.87
44294--44360
33
2.0
33
97
0
125
50
11
13
23
1.75
47407--47446
21
1.9
21
89
0
62
20
7
17
55
1.66

Tables:   1

The End!