Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007218.1 Hibiscus syriacus cultivar Beakdansim tig00019088_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49361

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3221--3269
2
25.0
2
95
4
91
48
0
0
51
1.00
4398--4449
2
26.5
2
96
3
97
51
0
0
48
1.00
4770--4810
3
14.0
3
94
5
75
65
0
0
34
0.93
15894--15953
23
2.6
23
83
2
75
46
11
13
28
1.78
17429--17458
2
15.0
2
100
0
60
50
0
0
50
1.00
19404--19434
16
1.9
16
93
0
53
70
0
6
22
1.09
29921--29957
19
1.9
19
94
0
65
32
29
16
21
1.95
30002--30055
21
2.6
21
78
0
63
27
20
20
31
1.97
30683--30788
20
5.4
20
86
3
108
15
16
22
45
1.85
30752--30795
20
2.2
20
87
0
61
13
13
18
54
1.71
32647--32715
20
3.5
20
83
0
93
36
24
20
18
1.95
32707--32782
33
2.3
34
90
2
118
44
19
21
14
1.86
32749--32786
20
1.9
20
94
0
67
47
18
21
13
1.82
32782--32823
19
2.2
19
86
0
57
19
16
21
42
1.89
32834--32897
20
3.2
20
80
12
78
18
20
25
35
1.95
32834--32897
19
3.2
20
84
8
78
18
20
25
35
1.95
33410--33491
42
2.0
42
85
0
110
20
39
17
23
1.92
33399--33494
21
4.6
21
72
5
86
18
37
17
26
1.93
34249--34383
20
6.8
20
90
0
198
28
17
21
32
1.96
36823--36876
24
2.2
24
90
0
81
40
20
16
22
1.91
37530--37567
17
2.2
17
100
0
76
26
5
36
31
1.79
37527--37577
17
2.6
20
76
23
63
25
7
39
27
1.83

Tables:   1

The End!