Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007222.1 Hibiscus syriacus cultivar Beakdansim tig00019109_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82561

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89--145
27
2.2
26
81
9
71
15
15
17
50
1.78
3635--3690
26
2.2
26
81
9
62
25
5
14
55
1.60
29694--29747
21
2.5
22
74
17
60
53
5
0
40
1.24
31292--31316
13
1.9
13
100
0
50
52
0
8
40
1.31
37046--37072
2
13.5
2
100
0
54
51
0
0
48
1.00
37662--37702
18
2.3
18
91
4
66
29
4
2
63
1.28
49592--49657
23
2.9
23
95
0
114
25
24
27
22
2.00
49569--49657
46
2.0
45
82
4
108
24
23
28
23
2.00
56306--56348
14
3.1
14
75
0
50
30
41
0
27
1.56
62700--62724
5
5.0
5
100
0
50
40
20
0
40
1.52
62899--62971
31
2.4
31
85
0
101
38
12
9
39
1.76
67031--67057
12
2.2
12
100
0
54
14
0
40
44
1.46
67266--67299
14
2.4
14
85
0
50
32
2
14
50
1.58
68559--68663
31
3.4
30
80
7
104
35
3
12
48
1.59
68585--68663
32
2.5
32
85
4
99
32
3
13
49
1.61
68920--68959
17
2.4
17
100
0
80
12
5
15
67
1.38
78206--78301
47
2.0
48
91
8
158
42
12
15
29
1.84

Tables:   1

The End!