Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007223.1 Hibiscus syriacus cultivar Beakdansim tig00019110_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75537

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5064--5096
2
16.5
2
100
0
66
51
0
0
48
1.00
5929--5966
20
1.9
20
88
0
58
26
21
5
47
1.71
10285--10316
2
16.0
2
100
0
64
50
0
0
50
1.00
12815--12858
22
2.0
22
82
8
54
45
6
15
31
1.73
13119--13150
15
2.0
17
88
11
50
46
0
0
53
1.00
18981--19006
2
13.0
2
100
0
52
50
0
0
50
1.00
20233--20308
32
2.5
31
76
4
82
53
2
15
27
1.55
20246--20306
31
1.9
32
86
3
88
49
3
18
29
1.63
21210--21269
31
1.9
31
82
0
75
46
15
16
21
1.83
32101--32171
29
2.5
28
81
6
88
47
2
5
43
1.41
32484--32524
22
2.0
19
86
13
55
46
0
2
51
1.14
33033--33083
16
3.4
16
81
15
72
56
23
11
7
1.61
37620--37691
32
2.2
32
80
0
81
43
5
9
41
1.61
45379--45500
60
2.0
60
81
6
140
44
7
16
31
1.75
55537--55596
30
2.0
30
100
0
120
43
10
6
40
1.64
55713--55762
21
2.5
20
93
6
91
28
40
20
12
1.87
57535--57588
13
4.2
13
78
4
56
16
22
40
20
1.91
58002--58057
15
3.6
15
74
9
58
16
21
35
26
1.94
57992--58054
32
2.0
32
87
0
90
17
19
34
28
1.94
65446--65596
57
2.6
56
77
12
171
44
17
5
32
1.72
69133--69194
21
2.9
21
85
4
88
22
33
29
14
1.94
69133--69195
22
2.9
22
85
2
92
22
33
28
15
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71708--71759
25
2.0
26
82
14
63
28
23
1
46
1.63
72438--72495
20
2.6
22
89
10
84
25
22
20
31
1.98
73049--73098
27
1.9
25
84
15
66
54
16
6
24
1.64

Tables:   1

The End!