Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007225.1 Hibiscus syriacus cultivar Beakdansim tig00019119_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58962

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
740--805
26
2.7
24
73
19
64
56
4
1
37
1.29
12051--12110
7
8.6
7
98
0
111
13
16
0
70
1.18
15181--15277
48
2.0
47
80
9
108
74
3
5
17
1.14
15387--15576
37
5.3
35
71
17
122
68
2
4
24
1.20
15424--15512
38
2.4
37
79
11
92
70
1
4
23
1.12
17128--17640
106
5.0
103
75
9
376
22
18
23
36
1.95
18313--18633
65
4.8
65
74
7
248
39
10
19
30
1.85
18248--18495
65
3.7
67
78
6
218
37
10
21
30
1.86
18448--18771
36
9.3
36
71
15
216
39
13
19
27
1.89
18456--18552
37
2.7
36
85
1
122
44
14
19
21
1.86
18390--18649
138
1.9
138
86
0
376
40
12
19
27
1.87
18478--18818
102
3.4
101
85
3
278
39
12
18
29
1.88
18484--18852
203
1.8
203
82
4
483
38
13
19
29
1.89
18686--18771
37
2.4
37
86
9
124
40
15
20
23
1.90
18586--18858
102
2.7
101
90
1
420
36
13
20
29
1.91
18778--18852
37
2.0
38
86
2
107
34
14
21
29
1.93
21651--21679
7
4.1
7
100
0
58
58
13
13
13
1.63
23187--23255
18
3.8
18
75
12
52
75
7
2
14
1.13
23176--23251
39
1.9
40
84
7
102
76
6
1
15
1.06
23175--23260
10
8.7
10
68
15
54
75
5
2
16
1.10
23172--23260
40
2.3
38
79
11
99
75
5
3
15
1.13
23303--23350
17
2.8
17
78
12
53
75
2
8
14
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23474--23505
2
16.5
2
93
6
57
53
0
0
46
1.00
23497--23575
34
2.3
35
82
14
101
64
2
3
29
1.24
23617--23656
20
1.9
22
90
10
66
67
0
0
32
0.91
29108--29162
27
2.1
27
86
3
76
20
10
20
49
1.78
37028--37187
65
2.5
64
86
5
234
28
15
21
33
1.94
37028--37229
65
3.1
64
79
10
232
27
15
22
33
1.95
38305--38348
21
2.1
21
86
0
61
34
15
38
11
1.84
51197--51281
23
3.8
22
76
14
84
31
21
16
30
1.95
53360--53411
19
2.7
19
100
0
104
21
17
30
30
1.96
53379--53535
65
2.4
64
82
10
185
26
15
24
34
1.95
53315--53476
84
1.9
83
87
8
240
26
15
24
33
1.95
54840--54895
29
1.9
29
88
0
85
39
19
3
37
1.69

Tables:   1

The End!