Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007232.1 Hibiscus syriacus cultivar Beakdansim tig00019143_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112919

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13782--13822
2
20.5
2
94
0
73
48
0
0
51
1.00
13921--13963
2
22.0
2
95
4
79
51
0
0
48
1.00
14799--14912
59
1.9
59
89
3
176
41
10
11
36
1.76
16263--16329
23
3.0
23
69
10
57
28
8
0
62
1.25
16308--16354
17
2.6
17
78
18
51
23
4
2
70
1.16
18978--19025
25
2.0
24
87
4
69
52
0
0
47
1.00
19852--19934
34
2.4
34
83
15
109
43
8
2
45
1.47
20399--20428
2
15.0
2
100
0
60
50
0
50
0
1.00
34785--34810
8
3.2
8
100
0
52
69
0
0
30
0.89
35193--35230
21
1.9
20
89
10
60
44
5
5
44
1.49
35195--35270
24
3.3
23
77
10
68
47
2
1
48
1.24
35195--35274
25
3.5
24
73
9
60
48
2
1
47
1.23
35402--35479
39
2.0
40
92
2
131
23
23
17
35
1.95
35737--35778
21
2.0
21
95
0
75
40
0
0
59
0.97
36355--36389
17
2.1
17
100
0
70
22
22
5
48
1.72
40257--40408
44
3.4
45
91
2
227
32
22
5
38
1.78
40500--40617
59
2.0
59
83
0
146
30
22
16
30
1.96
40762--40802
21
1.9
22
90
5
66
46
12
4
36
1.63
48781--48841
23
2.9
19
81
11
59
21
36
26
16
1.94
54601--54640
12
3.2
12
79
6
53
32
42
15
10
1.79
57492--57540
10
4.7
10
85
9
62
55
18
12
14
1.69
68140--68217
2
39.0
2
100
0
156
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68459--68498
17
2.3
17
86
4
53
45
0
2
52
1.14
68602--68743
70
2.0
70
100
0
284
43
15
7
33
1.74
83698--83768
10
6.7
10
70
12
52
26
35
25
12
1.92
83716--83769
20
2.7
20
91
0
90
27
33
27
11
1.91
83895--83999
14
7.4
14
78
19
110
8
28
39
23
1.84
83900--84002
24
4.3
25
76
20
112
9
27
39
23
1.86
83914--83957
10
4.4
10
83
11
63
9
27
38
25
1.86
103950--103998
19
2.6
19
90
0
71
40
4
16
38
1.67

Tables:   1

The End!