Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007233.1 Hibiscus syriacus cultivar Beakdansim tig00019144_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59148

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3474--3503
14
2.1
14
93
0
51
46
0
6
46
1.29
4957--4997
22
1.9
21
85
14
57
34
7
12
46
1.69
5201--5247
24
2.1
21
85
14
60
70
0
4
25
1.05
8047--8112
25
3.0
22
75
16
64
56
0
0
43
0.99
8044--8100
19
3.1
19
73
12
64
54
0
0
45
0.99
8045--8100
13
4.5
12
75
6
58
55
0
0
44
0.99
8882--8927
19
2.5
19
96
3
85
58
0
0
41
0.98
9612--9663
3
17.3
3
100
0
104
67
0
0
32
0.91
10138--10209
23
3.4
22
68
31
66
47
5
5
41
1.50
10138--10228
40
2.3
40
98
0
173
48
5
4
41
1.46
10160--10227
17
3.7
16
71
28
55
48
5
4
41
1.47
19506--19541
2
18.0
2
94
0
63
50
2
0
47
1.15
20033--20114
41
2.0
41
95
0
146
39
15
13
31
1.87
20124--20193
25
2.8
25
93
4
115
40
17
11
31
1.85
24048--24119
21
3.4
21
70
14
76
37
19
19
23
1.94
24045--24138
42
2.2
42
96
0
170
36
22
18
23
1.95
24072--24144
21
3.5
21
73
14
78
34
24
20
20
1.97
24098--24236
69
2.0
71
86
10
198
30
19
21
28
1.97
25726--25775
19
2.6
19
96
0
91
16
46
0
38
1.47
27691--27767
20
3.8
20
75
3
82
14
20
24
40
1.90
28519--28653
41
3.3
42
85
5
177
37
23
21
17
1.94
47605--47712
53
2.0
53
91
3
173
27
16
18
37
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51517--51572
28
2.0
28
89
3
87
46
3
8
41
1.52

Tables:   1

The End!