Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007234.1 Hibiscus syriacus cultivar Beakdansim tig00019147_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58922

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
502--531
13
2.3
13
94
0
51
56
3
0
40
1.16
521--566
25
1.9
25
86
8
69
43
0
0
56
0.99
11773--11822
4
13.0
4
83
12
61
80
0
18
2
0.82
11766--11821
8
7.1
8
78
11
53
80
0
17
1
0.80
11769--11821
23
2.4
22
87
6
79
81
0
16
1
0.79
11773--11822
19
2.6
19
84
12
66
80
0
18
2
0.82
14045--14933
113
8.0
113
92
3
1394
35
15
18
30
1.92
14045--14933
336
2.7
337
91
4
1383
35
15
18
30
1.92
14861--14916
17
3.2
17
68
26
53
48
8
25
17
1.76
15163--15247
3
27.7
3
83
4
80
43
0
1
55
1.07
15707--15741
11
3.2
11
87
0
52
82
2
14
0
0.77
17326--17355
2
15.0
2
100
0
60
50
0
0
50
1.00
17551--18011
232
2.0
233
93
0
789
27
23
20
28
1.99
37715--37924
102
2.1
102
88
1
314
44
19
15
20
1.86
39147--39202
21
2.7
20
80
8
58
17
12
0
69
1.18
41502--41543
12
3.6
12
83
6
50
21
11
9
57
1.63
41512--41546
12
3.0
12
87
8
54
20
8
8
62
1.49
47516--47595
24
3.5
23
70
17
69
23
23
21
31
1.98
49720--49758
2
19.5
2
100
0
78
48
0
0
51
1.00
50232--50437
65
3.2
64
79
10
213
31
23
18
25
1.98
57826--57869
21
2.1
21
82
0
52
9
43
15
31
1.79
58410--58471
2
31.0
2
93
6
108
48
0
1
50
1.10

Tables:   1

The End!