Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007235.1 Hibiscus syriacus cultivar Beakdansim tig00019155_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60025

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3698--3747
3
18.0
3
88
12
72
30
0
0
70
0.88
3697--3747
14
3.8
13
87
10
75
29
0
0
70
0.87
3698--3739
17
2.5
17
96
0
75
30
0
0
69
0.89
3804--3961
52
3.1
53
87
4
225
29
27
15
27
1.96
4730--4766
2
18.5
2
94
0
65
45
2
0
51
1.15
17264--17296
2
16.5
2
100
0
66
51
0
0
48
1.00
17458--17924
233
2.0
233
100
0
934
46
11
18
23
1.82
29595--29661
19
3.5
20
80
15
70
47
0
0
52
1.00
29615--29662
20
2.4
21
83
16
66
47
0
0
52
1.00
29675--29704
2
14.5
2
93
6
51
46
0
3
50
1.18
35587--35694
38
2.8
38
82
10
132
51
0
0
48
1.00
35614--35693
13
5.8
15
66
20
50
51
0
0
48
1.00
35811--35862
25
2.1
25
85
0
68
17
7
46
28
1.75
36135--36168
16
2.2
15
94
5
59
47
23
5
23
1.73
38839--38906
30
2.3
30
94
0
118
23
16
39
20
1.91
41767--41800
16
2.2
15
94
5
59
47
23
5
23
1.73
46888--47088
89
2.2
89
94
1
348
34
25
2
37
1.70
47146--47310
60
2.8
59
75
7
154
36
7
23
31
1.84
48992--49017
2
13.0
2
100
0
52
50
0
0
50
1.00
49389--49417
2
14.5
2
100
0
58
48
0
0
51
1.00
56185--56300
35
3.2
36
90
4
173
44
19
4
31
1.70
57839--57889
22
2.5
20
84
12
61
25
33
23
17
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57875--57907
15
2.2
15
94
0
57
30
33
21
15
1.94
58411--58442
16
1.9
17
93
6
57
28
31
31
9
1.88

Tables:   1

The End!