Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007237.1 Hibiscus syriacus cultivar Beakdansim tig00019168_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62540

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1069--1182
20
5.7
21
80
13
123
23
15
35
24
1.94
1693--1838
21
7.0
21
72
21
121
35
21
20
22
1.96
1690--1868
42
4.3
40
86
9
222
35
21
20
22
1.96
1690--1867
83
2.2
81
88
10
256
34
21
20
22
1.96
1758--1874
21
5.7
21
68
17
84
36
23
20
19
1.95
1690--1893
41
5.0
41
83
10
240
35
21
21
22
1.96
1690--1888
81
2.4
82
84
12
239
35
21
20
22
1.96
2071--2104
17
1.9
17
88
5
50
32
2
2
61
1.26
6599--10646
10
410.8
10
73
10
2131
23
5
28
42
1.76
6974--7245
98
2.8
96
78
9
257
28
5
26
39
1.77
9314--9366
18
2.9
18
88
2
70
22
5
33
37
1.78
9749--9784
17
2.1
17
89
0
54
30
0
25
44
1.54
10199--10325
31
4.2
31
85
3
145
14
7
31
46
1.72
15655--16058
7
57.9
7
96
0
468
8
4
48
38
1.54
16065--16153
10
9.4
10
72
18
57
17
5
32
43
1.73
16050--16098
20
2.5
20
80
10
55
14
6
30
48
1.67
21180--21220
7
5.9
7
100
0
82
14
26
43
14
1.84
21223--21460
7
34.0
7
95
3
354
3
0
52
43
1.22
21452--21529
30
2.6
30
85
4
86
17
5
30
46
1.70
21472--21594
30
3.9
30
74
14
113
19
4
32
43
1.72
21472--21594
10
12.8
10
72
8
85
19
4
32
43
1.72
21473--21584
40
2.6
45
83
6
126
20
4
32
42
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26634--26672
7
5.7
7
96
3
71
12
25
46
15
1.81
26614--26674
14
4.4
14
85
2
61
11
16
44
27
1.82
26669--26874
7
30.0
7
92
6
327
0
0
57
42
1.02
26868--26943
30
2.5
30
85
4
82
17
5
31
46
1.70
26886--27008
30
3.9
30
74
14
113
19
4
32
43
1.72
26879--27008
40
3.4
40
80
10
137
19
5
31
43
1.73
26886--27008
10
12.8
10
72
8
85
19
4
32
43
1.72
32033--32079
7
6.7
7
100
0
94
14
25
44
14
1.84
32076--32278
7
29.0
7
96
0
343
1
1
55
40
1.20
32270--32347
30
2.6
30
85
4
86
17
5
30
46
1.70
32290--32412
30
3.9
30
74
14
113
19
4
32
43
1.72
32269--32412
40
3.7
40
79
9
138
18
4
31
45
1.71
32290--32412
10
12.8
10
72
8
85
19
4
32
43
1.72
37411--37435
7
3.6
7
100
0
50
12
0
48
40
1.40
37452--37823
7
54.4
7
77
14
327
0
14
56
28
1.42
37459--37563
37
2.9
36
86
8
126
0
20
59
20
1.39
37480--37591
50
2.2
50
85
3
154
0
19
61
18
1.34
37804--62540
7
3586.3
7
96
3
42102
14
1
43
40
1.56

Tables:   1

The End!