Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007238.1 Hibiscus syriacus cultivar Beakdansim tig00019169_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66706

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--537
20
2.3
19
84
7
54
45
6
25
22
1.77
1063--1124
19
3.3
19
100
0
124
20
16
37
25
1.93
6572--6612
11
3.6
12
80
9
50
29
2
7
60
1.36
9700--9783
30
2.9
28
68
8
69
20
10
10
58
1.61
9760--9835
30
2.5
30
77
8
75
21
9
7
61
1.51
14574--14627
2
27.0
2
96
0
99
48
0
1
50
1.11
14811--14900
11
8.1
10
75
21
65
76
2
11
10
1.10
14890--14933
17
2.7
16
86
10
54
72
6
13
6
1.25
14904--14955
14
3.5
14
84
12
52
82
3
7
5
0.93
14868--14958
17
5.2
17
68
16
53
80
4
8
6
1.02
14934--14962
9
3.3
9
90
9
51
89
0
0
10
0.48
14920--14968
23
2.1
23
85
7
64
85
2
4
8
0.79
14890--14968
17
5.1
14
72
17
50
78
3
8
8
1.07
15602--15685
32
2.6
32
96
0
150
47
29
8
14
1.73
16024--16141
32
3.7
32
91
1
191
29
15
24
30
1.95
16250--16370
34
3.6
34
90
2
172
32
20
11
35
1.89
16644--17186
40
13.6
40
91
0
854
30
15
11
41
1.83
17111--17179
23
3.3
22
65
23
58
31
11
13
43
1.79
17242--17455
43
5.0
43
87
5
308
27
13
28
30
1.94
17476--17701
90
2.5
91
94
1
400
25
19
20
35
1.95
17955--17984
15
2.0
15
93
0
51
33
0
3
63
1.11
17947--17984
18
2.1
18
90
9
60
34
0
2
63
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17943--17982
12
3.2
13
86
6
57
35
0
2
62
1.09
17953--17994
18
2.3
19
79
4
50
38
0
4
57
1.20
19810--19923
59
1.9
59
80
3
131
19
9
12
58
1.61
19810--19923
30
3.9
28
72
9
84
19
9
12
58
1.61
19900--19975
30
2.5
30
77
8
75
21
9
7
61
1.51
20245--20284
15
2.6
16
78
21
50
32
5
5
57
1.42
21945--21975
16
1.9
16
93
0
53
0
16
0
83
0.64
21934--21979
12
4.0
11
83
8
56
0
15
2
82
0.76
25649--25685
14
2.6
15
83
12
51
13
24
10
51
1.73
27395--27616
64
3.4
63
76
13
211
34
20
17
27
1.95
28282--28340
30
2.0
30
82
0
73
18
20
23
37
1.94
31874--31922
14
3.5
15
83
10
59
0
22
0
77
0.77
31879--31922
14
3.1
14
90
3
61
0
20
0
79
0.73
54275--54308
2
17.0
2
100
0
68
50
0
0
50
1.00
55874--55935
27
2.2
27
83
16
74
72
1
1
24
1.02
59628--59683
2
28.0
2
100
0
112
50
0
0
50
1.00
60815--60869
2
26.5
2
92
7
92
49
0
3
47
1.19
61182--61222
3
14.0
3
94
5
75
65
0
0
34
0.93

Tables:   1

The End!