Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000724.1 Hibiscus syriacus cultivar Beakdansim tig00001404_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50175

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
825--920
43
2.3
43
81
1
122
22
9
17
50
1.75
6864--6901
2
18.0
2
89
10
58
47
2
2
47
1.30
7896--7977
23
3.6
23
84
0
101
19
25
25
29
1.99
12214--12243
2
15.0
2
100
0
60
50
0
0
50
1.00
13645--13677
8
4.1
8
88
11
50
54
0
21
24
1.45
16233--16356
41
3.0
41
98
0
239
32
24
18
25
1.97
22345--22396
23
2.3
23
89
0
77
23
26
21
28
1.99
40665--40730
32
2.1
32
88
0
96
43
4
7
43
1.53
42574--42619
3
15.0
3
82
13
58
65
0
0
34
0.93
42574--42622
12
3.9
13
84
10
75
65
0
0
34
0.93
42869--42911
19
2.2
19
87
8
59
34
6
2
55
1.39
45437--45464
7
4.0
7
100
0
56
42
0
0
57
0.99

Tables:   1

The End!