Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007240.1 Hibiscus syriacus cultivar Beakdansim tig00019179_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87917

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3148--3362
107
2.0
110
90
4
348
34
16
10
39
1.82
4667--4701
18
1.9
18
94
0
61
14
20
48
17
1.81
9676--9717
22
2.0
22
85
4
59
16
26
11
45
1.82
16454--16572
60
2.0
60
86
0
166
42
12
9
36
1.75
22701--22783
41
2.0
41
97
0
157
39
12
15
32
1.84
24362--24394
17
1.9
17
93
0
57
24
21
0
54
1.45
24792--24834
21
2.0
21
100
0
86
37
30
4
27
1.77
57903--57942
20
2.0
19
85
9
53
22
7
15
55
1.65
58069--58136
23
2.9
23
81
12
84
13
10
16
60
1.59
61498--61560
21
2.8
21
73
20
56
71
1
0
26
0.95
62374--62405
2
16.0
2
100
0
64
50
0
0
50
1.00
62998--63038
19
2.1
20
86
4
57
68
0
0
31
0.90
77235--77281
24
2.0
24
95
0
85
27
21
17
34
1.95
79831--79922
33
2.8
33
88
3
134
47
18
21
11
1.80
79922--79996
19
4.2
19
70
19
63
13
21
22
42
1.87
79932--79997
19
3.7
19
75
19
79
10
22
21
45
1.82
80104--80140
14
2.6
14
91
0
65
45
21
0
32
1.52
81484--81553
21
3.3
21
66
5
52
21
20
35
22
1.96
82026--82109
19
4.6
19
80
15
88
46
26
17
9
1.79
82042--82106
33
1.9
34
90
3
105
49
26
16
7
1.73
82115--82248
19
7.3
19
85
9
179
8
20
22
48
1.76
82337--82712
94
4.1
93
92
2
580
47
18
11
22
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84395--84501
20
5.8
19
78
14
116
48
19
20
11
1.79
84395--84506
19
6.1
19
77
14
117
47
19
21
11
1.81
84502--84594
33
2.8
33
88
1
123
11
21
23
43
1.86
85125--85199
20
3.7
20
85
1
96
21
20
20
38
1.93
85123--85215
41
2.3
40
84
1
123
22
20
20
36
1.95
85123--85221
20
4.9
20
81
4
92
22
20
20
37
1.95
85143--85230
20
4.3
20
82
2
113
20
20
19
39
1.92
85122--85273
61
2.5
61
76
4
162
25
19
22
32
1.97

Tables:   1

The End!