Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007241.1 Hibiscus syriacus cultivar Beakdansim tig00019189_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66152

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3329--3386
25
2.3
25
96
0
107
46
5
20
27
1.72
4425--4507
19
4.4
19
79
0
85
46
4
14
33
1.66
4425--4507
38
2.2
38
82
0
94
46
4
14
33
1.66
4591--4673
39
2.1
39
91
4
132
28
6
15
49
1.68
5937--6016
42
1.9
42
86
0
115
48
11
7
32
1.67
9034--9062
2
14.5
2
100
0
58
48
0
0
51
1.00
10019--10043
12
2.1
12
100
0
50
40
16
8
36
1.77
11967--12012
18
2.7
17
93
6
76
32
6
32
28
1.83
12582--12669
37
2.3
38
82
3
115
42
38
9
10
1.71
12599--12677
37
2.1
38
80
2
88
48
31
6
13
1.68
12800--12876
33
2.4
33
88
2
120
40
35
10
14
1.80
12688--13055
174
2.0
181
88
8
556
36
26
10
26
1.89
12983--13055
38
1.9
38
91
2
121
39
36
10
12
1.78
19668--19772
34
3.1
34
98
0
201
28
7
20
42
1.80
20208--20334
54
2.4
52
89
5
195
9
25
18
47
1.78
21076--21108
2
16.5
2
100
0
66
48
0
0
51
1.00
23413--23461
21
2.3
21
100
0
98
40
22
4
32
1.73
39262--39297
3
12.0
3
93
0
63
0
30
0
69
0.89
41618--41684
31
2.2
31
83
0
80
41
7
14
35
1.75
49675--49711
16
2.3
16
90
9
58
43
2
0
54
1.14
56628--56772
42
3.5
42
90
1
213
35
7
24
32
1.83
65931--65970
21
1.9
21
89
0
62
15
27
25
32
1.95

Tables:   1

The End!