Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007242.1 Hibiscus syriacus cultivar Beakdansim tig00019192_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62466

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9603--9679
21
3.5
22
73
18
63
44
2
2
50
1.29
9648--9682
17
2.1
17
88
0
52
45
2
0
51
1.16
15688--15737
20
2.4
22
80
16
70
54
4
0
42
1.19
15918--15981
13
4.9
13
80
0
74
50
15
1
32
1.54
15914--15968
26
2.1
26
89
0
83
50
20
0
29
1.48
21688--21719
2
16.0
2
93
0
55
46
0
3
50
1.17
26879--26929
24
2.1
25
85
7
70
39
11
11
37
1.79
28629--28695
31
2.2
29
78
5
71
41
11
14
31
1.83
33603--33663
23
2.9
20
71
20
52
54
0
3
42
1.17
34846--34917
31
2.3
31
95
2
126
41
4
5
48
1.45
41390--41454
29
2.2
29
80
0
76
53
3
3
40
1.32
41408--41469
29
2.1
29
88
5
90
45
4
6
43
1.51
42917--45150
222
10.1
222
89
1
3284
36
6
32
25
1.81
51467--51546
20
4.0
20
91
1
133
27
18
18
35
1.95
55008--55043
18
2.0
18
94
0
63
38
16
2
41
1.63
55208--55333
56
2.2
56
84
0
153
41
11
18
28
1.86
55621--55660
2
20.0
2
100
0
80
50
0
0
50
1.00
58284--58336
22
2.4
22
84
9
63
52
0
7
39
1.30
59045--59084
20
1.9
22
90
10
66
40
12
0
47
1.41

Tables:   1

The End!