Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007249.1 Hibiscus syriacus cultivar Beakdansim tig00019206_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46462

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4123--4199
24
3.2
24
79
5
75
58
16
14
10
1.63
4373--4403
14
2.2
14
94
0
53
61
12
12
12
1.58
7676--7722
23
2.1
23
88
4
69
36
17
4
42
1.68
8365--8497
60
2.2
59
83
10
155
36
15
15
32
1.89
23676--23701
13
2.0
13
100
0
52
23
0
15
61
1.33
23685--23755
21
3.0
24
73
17
69
22
1
8
67
1.25
26160--26349
102
1.9
102
81
4
231
26
18
23
32
1.97
27572--27631
31
1.9
31
89
0
93
45
11
16
26
1.82
31408--32192
394
2.0
394
97
0
1491
34
16
14
34
1.89
37077--37149
35
2.0
37
81
5
87
50
2
1
45
1.24
42646--42713
28
2.4
28
85
4
84
36
8
13
41
1.75
42794--42871
31
2.6
29
80
13
86
35
11
11
41
1.78

Tables:   1

The End!