Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007253.1 Hibiscus syriacus cultivar Beakdansim tig00019216_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70431

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
680--728
20
2.4
21
75
6
55
32
22
6
38
1.79
827--867
20
2.1
20
90
4
66
34
19
14
31
1.92
4832--4872
20
2.0
20
86
9
57
43
2
2
51
1.28
6086--6176
48
1.9
48
86
2
130
45
5
15
34
1.69
28395--28428
17
2.0
17
88
0
50
41
0
0
58
0.98
31510--31558
2
24.5
2
100
0
98
51
0
0
48
1.00
33078--33114
4
9.2
4
93
0
65
45
24
0
29
1.53
44524--44592
9
7.3
9
73
9
57
14
27
27
30
1.95
44524--44568
19
2.4
19
88
0
63
13
22
28
35
1.92
44594--44629
17
2.1
17
100
0
72
19
44
25
11
1.83
49141--49177
11
3.7
10
89
10
58
13
21
27
37
1.91
49226--49261
17
2.1
17
89
0
54
19
41
22
16
1.90
51928--51966
17
2.4
16
82
4
51
53
5
0
41
1.23
66583--66620
15
2.4
17
86
8
53
60
0
2
36
1.11
69977--70299
67
5.0
67
77
16
351
27
13
13
45
1.80

Tables:   1

The End!