Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007259.1 Hibiscus syriacus cultivar Beakdansim tig00019240_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60453

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9258--9301
23
2.0
23
82
13
56
34
6
4
54
1.47
24915--24968
27
2.1
24
86
10
72
40
7
20
31
1.80
24922--24975
27
2.1
26
83
10
67
40
9
18
31
1.82
32538--32607
12
5.8
12
80
6
70
50
18
17
14
1.79
32536--32644
48
2.3
47
83
3
128
46
17
17
18
1.84
32536--32644
24
4.5
25
76
6
100
46
17
17
18
1.84
33770--33805
18
2.0
18
88
0
54
30
16
0
52
1.44
35115--35196
13
6.3
13
94
0
137
17
20
45
17
1.86
37279--37348
12
5.8
12
80
6
79
51
18
15
14
1.77
37277--37385
48
2.3
47
85
3
137
47
17
16
18
1.83
37277--37385
24
4.5
25
78
6
109
47
17
16
18
1.83
38510--38545
18
2.0
18
88
0
54
30
16
0
52
1.44
39819--39873
10
6.6
9
84
16
50
23
23
34
18
1.96
39840--39870
7
4.3
7
92
8
53
25
25
35
12
1.92
39820--39899
8
10.5
8
74
24
68
21
23
38
16
1.92
39847--39943
13
7.3
13
91
2
140
18
21
43
16
1.88
43121--43171
27
1.9
26
84
4
66
17
25
25
31
1.97
50203--50232
13
2.4
13
94
5
53
43
0
30
26
1.55
55034--55080
24
2.0
24
91
0
76
21
23
40
14
1.90

Tables:   1

The End!