Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000726.1 Hibiscus syriacus cultivar Beakdansim tig00001412_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96706

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9311--9969
227
2.9
228
82
4
743
34
16
15
33
1.91
16459--16519
23
2.7
23
89
0
95
27
27
26
18
1.98
17162--17322
64
2.5
66
81
9
192
26
19
18
34
1.95
22521--22934
230
1.8
230
83
4
557
31
16
16
35
1.91
23262--23678
134
3.1
132
83
5
516
30
21
18
29
1.97
23257--23725
134
3.5
131
79
6
444
31
21
17
28
1.97
23852--23936
3
28.0
3
92
2
134
35
1
0
63
1.02
26784--27092
101
3.0
101
91
2
465
41
15
10
32
1.81
30689--30767
39
2.0
39
85
4
106
34
21
24
20
1.97
31015--31053
14
2.8
14
84
0
51
35
28
12
23
1.91
31902--31936
2
17.5
2
88
11
54
48
0
2
48
1.16
33378--33462
38
2.2
36
80
10
98
44
2
3
49
1.32
33822--33884
23
2.8
23
74
9
60
49
9
0
41
1.35
34483--34599
41
2.9
41
81
10
132
41
1
2
53
1.24
34517--34594
12
5.9
13
72
20
56
39
1
1
57
1.15
45124--45182
22
2.7
22
77
15
68
47
1
6
44
1.39
47414--47457
23
2.0
22
90
4
70
70
2
0
27
0.99
47917--47947
16
1.9
16
93
0
53
19
9
16
54
1.68
49038--49111
32
2.4
31
82
10
91
45
9
31
13
1.75
49407--49463
2
29.0
2
94
3
98
50
1
0
47
1.11
50829--50860
14
2.1
16
88
11
50
15
9
0
75
1.05
50879--50921
21
2.0
21
86
8
61
18
0
2
79
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50879--50918
16
2.6
15
85
14
55
17
0
2
80
0.83
51508--51536
2
15.0
2
92
7
51
48
0
0
51
1.00
51619--51666
9
5.1
9
80
9
60
50
2
0
47
1.12
52000--52058
19
3.2
19
75
18
70
47
33
15
3
1.62
52005--52045
17
2.7
14
80
20
55
46
34
14
4
1.66
52153--52179
5
5.4
5
100
0
54
44
37
18
0
1.50
66039--66068
10
3.0
10
100
0
60
40
40
10
10
1.72
69576--69631
24
2.3
23
80
19
62
39
7
3
50
1.47
73933--74027
28
3.3
26
75
16
73
37
11
7
43
1.69
73958--74034
30
2.7
28
80
7
82
41
7
5
45
1.55
74291--74436
49
3.0
49
96
0
265
34
12
14
39
1.83
81807--81842
18
2.0
18
100
0
72
22
16
33
27
1.95
85787--85906
21
5.6
21
75
16
95
25
27
18
29
1.98
91846--91982
64
2.1
64
89
0
202
44
13
8
32
1.75
91956--92002
23
2.0
23
83
0
58
38
12
14
34
1.85
92070--92459
111
3.5
111
90
3
604
43
12
11
32
1.79
92779--92982
87
2.3
87
94
0
354
42
10
13
33
1.78
92917--92966
23
2.2
23
88
0
73
40
12
16
32
1.84
92917--92973
23
2.5
23
82
0
60
43
10
14
31
1.79
93210--93670
111
4.1
112
91
2
716
42
12
12
32
1.79
93210--93670
224
2.1
222
90
4
714
42
12
12
32
1.79

Tables:   1

The End!