Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007261.1 Hibiscus syriacus cultivar Beakdansim tig00019246_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50462

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3460--3503
14
2.9
15
93
6
72
47
13
22
15
1.81
3891--4302
206
2.0
205
90
2
657
36
18
18
25
1.94
6185--6229
21
2.1
21
83
0
54
33
11
4
51
1.58
6685--6728
23
2.0
23
81
4
54
50
11
2
36
1.51
10902--10939
17
2.2
17
100
0
76
42
5
21
31
1.75
12650--12709
23
2.9
20
87
9
77
23
33
25
18
1.97
17795--17849
20
2.7
20
83
8
67
23
38
14
23
1.92
21293--21342
24
2.1
24
85
7
66
60
14
2
24
1.45
30469--30497
12
2.4
12
100
0
58
62
13
6
17
1.52
33174--33506
30
11.4
30
73
8
220
57
10
12
20
1.63
33204--33360
85
1.8
85
80
2
190
59
8
12
19
1.59
33354--33393
20
2.0
20
90
0
62
57
10
17
15
1.64
33289--33499
59
3.6
60
74
3
176
57
9
11
20
1.62
33995--34052
3
19.7
3
80
16
68
65
1
0
32
1.03
33995--34052
17
3.1
19
80
16
68
65
1
0
32
1.03
35753--35795
21
2.2
20
87
8
61
41
2
2
53
1.26
35752--35802
21
2.5
20
78
15
59
43
1
1
52
1.23
42509--42537
2
14.5
2
100
0
58
51
0
0
48
1.00
42849--42903
16
3.4
16
87
0
83
56
18
12
12
1.67
43890--43921
14
2.3
14
94
0
55
50
28
12
9
1.71
45588--45619
2
16.0
2
100
0
64
50
0
0
50
1.00
47179--47244
32
2.0
32
82
5
78
43
16
21
18
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49389--49430
20
2.1
19
91
8
66
47
4
0
47
1.23

Tables:   1

The End!