Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007262.1 Hibiscus syriacus cultivar Beakdansim tig00019247_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90777

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1026--1079
21
2.6
21
90
0
81
24
20
33
22
1.97
3483--3545
18
3.6
18
80
4
74
53
3
3
39
1.33
3478--3545
35
1.9
35
87
0
100
55
2
2
38
1.30
6767--6795
2
14.5
2
100
0
58
0
48
0
51
1.00
17173--17258
24
3.6
24
77
0
73
45
16
13
24
1.84
21518--21597
41
2.0
39
92
4
133
31
7
11
50
1.66
24336--24368
15
2.1
17
88
11
52
45
6
15
33
1.70
24206--24438
96
2.4
98
89
7
348
36
5
8
49
1.56
24312--24525
115
1.9
115
94
2
376
39
5
7
46
1.57
24408--24457
19
2.6
19
87
6
66
20
4
6
70
1.25
24408--24454
18
2.6
18
89
3
67
19
4
6
70
1.26
25091--25143
21
2.5
21
87
0
79
7
33
39
18
1.79
34729--34765
16
2.2
16
90
4
56
48
0
0
51
1.00
39148--39208
31
2.0
31
90
6
97
52
9
6
31
1.60
42324--42357
16
2.1
17
94
5
61
32
0
29
38
1.58
45837--45864
14
2.0
14
100
0
56
21
35
0
42
1.53
51592--51686
24
4.0
24
74
10
86
22
14
16
46
1.84
51847--51875
2
14.5
2
100
0
58
48
0
0
51
1.00
54412--54478
31
2.2
31
88
0
98
49
14
17
17
1.80
57326--57399
37
2.0
37
94
5
132
35
18
21
24
1.96
57491--57528
17
2.2
18
95
4
69
34
0
0
65
0.93
57494--57537
23
1.9
24
86
9
65
38
0
0
61
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58107--58153
22
2.3
22
85
10
64
57
0
8
34
1.29
62388--62505
26
4.1
28
78
16
100
56
0
1
41
1.09
72195--72280
3
28.7
3
92
0
109
25
1
5
67
1.20
75951--76002
21
2.5
21
81
3
61
38
19
25
17
1.93
76033--76085
20
2.7
20
87
0
79
26
28
18
26
1.98
76627--76663
14
2.6
14
100
0
74
40
24
21
13
1.89
87483--87542
8
7.8
8
81
9
54
81
0
5
13
0.84
87476--87520
7
6.7
7
87
5
58
86
0
2
11
0.65
87476--87544
20
3.4
20
86
8
86
79
0
7
13
0.92
87476--87544
8
9.0
8
80
16
51
79
0
7
13
0.92
88511--88926
52
7.9
55
84
7
445
28
14
29
27
1.95
88510--88926
107
3.9
110
83
7
490
28
14
29
27
1.95
88511--88926
159
2.6
160
83
7
485
28
14
29
27
1.95
88866--89399
51
10.3
50
79
10
438
33
17
24
24
1.96

Tables:   1

The End!