Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007264.1 Hibiscus syriacus cultivar Beakdansim tig00019254_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56817

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
626--653
2
14.0
2
100
0
56
50
0
0
50
1.00
9342--9398
20
2.8
20
77
15
64
47
1
3
47
1.29
9342--9406
21
3.2
21
79
14
66
50
1
3
44
1.26
12000--12179
51
3.5
51
82
8
199
16
31
28
24
1.96
15045--15377
111
3.0
111
95
0
585
45
11
7
36
1.68
15509--15544
10
3.5
11
88
11
51
41
0
25
33
1.55
15666--15791
50
2.5
50
75
5
137
22
26
33
17
1.96
22396--22425
15
2.0
15
93
0
51
30
46
23
0
1.52
26108--26154
21
2.2
22
85
11
62
55
0
8
36
1.31
28729--28776
23
2.1
23
84
0
60
35
10
18
35
1.85
29200--29262
23
2.7
23
92
0
99
38
20
4
36
1.74
29682--29767
39
2.2
39
93
0
145
18
13
18
48
1.80
30024--30060
18
2.1
18
89
0
56
51
10
5
32
1.60
30482--30630
23
6.5
23
89
3
219
40
19
5
34
1.74
30482--30630
46
3.2
46
96
0
271
40
19
5
34
1.74
30975--31040
25
2.6
25
80
0
87
42
13
9
34
1.76
32285--32327
20
2.3
18
85
14
61
20
16
11
51
1.75
32290--32336
20
2.4
19
82
10
67
19
17
10
53
1.72
32458--32503
20
2.3
20
89
10
76
17
17
10
54
1.70
33853--33889
2
18.5
2
100
0
74
48
0
0
51
1.00
34456--34497
3
14.0
3
100
0
84
33
0
0
66
0.92
34959--34984
2
13.0
2
100
0
52
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49859--49941
29
2.8
29
83
1
112
42
12
13
32
1.81

Tables:   1

The End!