Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007266.1 Hibiscus syriacus cultivar Beakdansim tig00019260_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72597

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1873--1919
21
2.3
21
79
13
55
40
14
6
38
1.72
11786--11815
2
15.0
2
100
0
60
50
0
0
50
1.00
11813--11843
4
7.8
4
100
0
62
25
0
22
51
1.48
19083--19135
26
2.0
26
89
7
81
32
24
3
39
1.73
24638--24706
31
2.2
31
82
5
77
33
8
14
43
1.76
25447--25506
2
30.0
2
100
0
120
50
0
0
50
1.00
29701--29732
2
16.0
2
93
0
55
46
0
3
50
1.17
29812--29842
10
3.1
10
95
0
53
67
0
9
22
1.19
30495--30539
3
14.0
3
90
4
54
28
0
0
71
0.87
33560--33603
12
3.7
12
85
11
63
20
25
13
40
1.89
33555--33610
24
2.3
24
96
0
103
25
26
14
33
1.94
33760--33816
23
2.5
23
85
5
80
36
19
17
26
1.94
34531--34584
22
2.5
21
85
8
65
48
27
0
24
1.52
35328--35359
16
2.0
16
100
0
64
37
6
43
12
1.68
36093--36143
25
2.0
25
100
0
102
41
23
11
23
1.87
37516--38127
179
3.4
181
80
5
612
44
11
15
28
1.81
43586--43637
19
2.7
20
93
3
88
51
0
0
48
1.00
50646--50690
20
2.2
20
96
0
81
55
0
20
24
1.43
52367--52530
60
2.7
60
80
5
179
41
4
20
33
1.72
53705--53736
16
2.0
16
100
0
64
62
0
0
37
0.95
53707--53742
16
2.3
16
90
4
56
61
0
2
36
1.11
53789--53848
17
3.5
17
80
8
61
28
1
3
66
1.17

Tables:   1

The End!