Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007268.1 Hibiscus syriacus cultivar Beakdansim tig00019271_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47916

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5972--6002
11
2.8
11
95
0
53
16
9
9
64
1.48
10361--10393
16
2.1
16
94
0
57
33
15
6
45
1.70
13893--13925
16
2.1
16
100
0
66
33
18
6
42
1.75
16316--16341
13
2.0
13
100
0
52
30
30
0
38
1.58
17197--17249
20
2.7
20
91
2
81
37
13
5
43
1.67
17997--18038
13
3.4
12
80
12
50
73
4
14
7
1.21
17997--18043
24
1.9
25
87
12
71
72
4
17
6
1.22
29528--29639
35
3.2
35
87
1
161
27
37
2
32
1.71
29805--29832
6
4.7
6
100
0
56
14
32
0
53
1.41
34412--34454
20
2.0
22
86
8
63
44
4
13
37
1.65
35310--35359
2
25.0
2
100
0
100
50
0
0
50
1.00
42394--42465
15
4.8
16
71
19
57
13
23
0
62
1.31
47541--47586
21
2.2
21
96
0
83
28
36
4
30
1.76

Tables:   1

The End!