Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007270.1 Hibiscus syriacus cultivar Beakdansim tig00019276_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  120299

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13585--13609
2
12.5
2
100
0
50
52
0
0
48
1.00
16982--17894
455
2.0
455
99
0
1799
32
18
23
25
1.97
21171--21217
25
1.9
25
82
4
60
25
10
17
46
1.79
25661--25720
19
3.2
18
79
11
59
31
23
8
36
1.84
25671--25723
19
2.8
18
77
8
61
33
22
7
35
1.83
29015--29053
2
19.5
2
100
0
78
51
0
0
48
1.00
30709--30753
16
2.8
16
89
0
72
31
13
13
42
1.82
35322--35374
24
2.2
24
89
0
79
33
20
13
32
1.91
50935--50973
19
2.1
19
85
9
53
56
17
0
25
1.41
53849--53897
21
2.5
19
80
12
55
30
14
8
46
1.73
56134--56168
2
17.5
2
100
0
70
48
0
0
51
1.00
58593--58676
44
1.9
44
90
0
132
35
22
13
28
1.92
58665--58711
18
2.7
18
90
3
69
27
29
8
34
1.87
59537--59585
21
2.5
19
80
12
55
30
14
8
46
1.73
61872--61908
2
18.5
2
100
0
74
48
0
0
51
1.00
66900--66954
21
2.6
21
77
8
67
45
0
0
54
0.99
72511--72551
16
2.6
16
96
0
73
36
4
0
58
1.20
80211--80332
59
2.0
60
84
1
156
27
13
19
38
1.90
81776--81806
15
2.1
14
94
5
53
90
9
0
0
0.46
82965--83145
60
3.1
59
75
8
163
32
23
4
39
1.76
94489--94828
182
1.9
182
87
2
504
40
12
8
38
1.75
96883--96909
12
2.2
12
100
0
54
22
7
22
48
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102375--102503
69
1.9
69
91
0
213
40
10
14
34
1.80
105975--106023
24
2.0
24
92
0
80
32
12
20
34
1.90
108207--108231
12
2.1
12
100
0
50
24
0
0
76
0.80
112251--112289
12
3.0
13
85
7
53
51
0
2
46
1.14
115002--115168
90
1.9
89
79
9
189
53
1
1
43
1.16
115092--115169
22
3.5
21
68
16
59
50
1
0
48
1.09
115901--116005
55
1.9
55
86
3
149
39
17
14
29
1.89
119444--119498
2
28.0
2
92
3
94
50
0
1
47
1.11
120015--120069
28
2.0
29
89
7
87
21
30
34
12
1.91
120057--120117
31
2.0
31
100
0
122
27
29
22
19
1.98

Tables:   1

The End!