Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007274.1 Hibiscus syriacus cultivar Beakdansim tig00019287_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81102

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23355--23409
24
2.3
24
87
0
74
18
9
14
58
1.62
34436--34495
31
1.9
31
100
0
120
36
23
13
26
1.92
34760--34804
16
2.8
16
93
0
72
8
11
24
55
1.63
39344--39388
17
2.6
17
75
0
54
42
0
0
57
0.98
40819--40854
2
18.0
2
100
0
72
50
0
0
50
1.00
47970--48311
174
2.0
174
95
0
612
36
21
22
19
1.95
50343--50403
23
2.7
23
78
12
72
13
24
8
54
1.66
55107--55147
17
2.3
18
87
8
66
17
9
9
63
1.51
55116--55151
17
2.1
17
100
0
72
19
5
11
63
1.46
70968--71445
55
8.8
55
85
4
508
29
25
16
28
1.97
71399--71557
54
2.9
54
96
0
282
18
26
18
36
1.94
71961--72056
36
2.6
36
85
1
129
22
19
21
35
1.96
76684--76834
72
2.1
72
93
0
257
23
26
13
36
1.92
77500--77610
53
2.1
55
86
3
154
21
23
11
43
1.85

Tables:   1

The End!