Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007281.1 Hibiscus syriacus cultivar Beakdansim tig00019320_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67912

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10512--10793
137
2.1
137
96
2
521
42
20
8
28
1.82
13017--13079
22
2.9
22
97
0
117
39
23
12
23
1.89
14986--15075
46
2.0
46
97
0
171
40
11
21
27
1.87
18114--18142
13
2.3
13
94
5
51
44
0
0
55
0.99
22928--22967
18
2.2
17
91
8
62
55
0
0
45
0.99
28505--28552
23
2.1
23
84
0
60
37
6
16
39
1.74
29198--29647
182
2.5
182
87
0
659
29
14
12
44
1.81
29518--30093
112
5.1
112
92
1
911
25
13
14
46
1.80
29518--30093
225
2.6
224
92
0
927
25
13
14
46
1.80
32894--33005
57
1.9
58
85
5
156
33
16
14
35
1.89
34931--34981
2
25.5
2
95
0
93
52
0
0
47
1.00
37776--37833
27
2.1
28
78
9
66
24
17
15
43
1.87
38207--38244
8
4.9
8
80
6
51
18
0
31
50
1.47
38181--38244
31
2.1
30
85
2
83
20
0
31
48
1.50
40395--40453
3
19.7
3
100
0
118
33
0
0
66
0.92
49098--49140
19
2.3
18
88
11
61
16
18
20
44
1.87
52590--52716
9
15.4
8
73
19
75
59
0
0
40
0.98
52600--52692
25
3.4
26
76
15
73
62
0
0
37
0.96
52588--52702
31
3.5
33
94
5
207
60
0
0
39
0.97
58135--58170
17
2.1
17
100
0
72
30
0
22
47
1.52
58947--59070
60
2.1
60
100
0
248
37
15
24
22
1.93
59379--59742
43
8.6
43
74
12
261
28
16
6
49
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59318--59743
128
3.3
126
80
9
386
27
16
6
49
1.69
59368--59742
85
4.4
86
75
10
304
27
16
5
50
1.68
59668--59817
75
2.0
77
85
10
211
27
18
5
48
1.69
65562--65618
28
2.0
28
86
6
80
38
3
10
47
1.55

Tables:   1

The End!