Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007282.1 Hibiscus syriacus cultivar Beakdansim tig00019321_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77339

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5952--6037
20
4.3
20
74
10
86
31
10
19
38
1.86
9085--9164
20
4.0
20
74
9
65
38
15
18
27
1.91
9387--9446
20
3.1
19
88
7
84
25
25
5
45
1.73
9464--9574
38
3.0
37
84
2
150
24
27
7
41
1.81
9797--9841
6
8.0
6
80
14
51
22
0
0
77
0.76
9793--9840
9
5.3
9
80
16
55
25
0
0
75
0.81
9794--9842
15
3.2
15
94
2
80
24
0
0
75
0.80
12904--13003
23
4.3
23
88
2
103
26
20
23
31
1.98
17407--17440
17
1.9
17
88
5
50
38
2
11
47
1.55
21930--21986
24
2.4
24
80
8
64
12
12
19
56
1.67
22676--23170
229
2.2
228
95
1
902
44
7
8
39
1.63
23429--23475
20
2.4
19
86
10
67
55
8
17
19
1.67
23276--23689
181
2.3
182
88
2
591
42
13
16
28
1.86
25878--25943
21
3.1
21
91
0
96
43
10
28
16
1.81
27830--27878
19
2.6
19
93
0
80
30
2
10
57
1.43
27997--29749
200
8.9
200
91
4
2925
36
14
17
31
1.90
27997--29749
399
4.4
399
94
3
3118
36
14
17
31
1.90
27997--29749
599
3.0
599
95
2
3093
36
14
17
31
1.90
31206--31287
6
13.7
6
81
0
65
37
7
32
21
1.81
31206--31287
18
4.6
18
82
0
74
37
7
32
21
1.81
31223--31291
3
23.0
3
78
0
75
36
5
33
24
1.80
31206--31275
30
2.3
30
92
0
113
38
8
32
20
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32567--32639
23
3.2
23
88
0
101
34
4
21
39
1.73
35850--35914
25
2.6
25
97
0
121
40
10
12
36
1.78
36256--36327
23
3.2
22
90
4
99
34
4
22
38
1.73
36741--36813
23
3.2
23
86
0
101
36
4
19
39
1.71
35914--37705
489
3.7
490
97
1
3372
40
7
10
40
1.68
37235--37302
23
3.0
23
88
0
100
33
4
22
39
1.74
35914--37705
490
3.7
489
97
1
3370
40
7
10
40
1.68
42714--42750
19
1.9
19
89
10
58
35
8
10
45
1.69
51363--51406
17
2.6
17
96
0
79
4
36
29
29
1.77
53093--53131
16
2.5
15
83
4
51
30
2
0
66
1.05
56108--56141
16
2.1
16
94
0
59
32
8
26
32
1.87
56890--56922
15
2.1
16
88
5
50
51
15
24
9
1.72
76507--76535
13
2.1
14
93
6
51
27
6
13
51
1.66

Tables:   1

The End!