Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007285.1 Hibiscus syriacus cultivar Beakdansim tig00019337_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59108

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2588--2635
2
24.0
2
95
0
87
50
0
2
47
1.12
5376--5433
29
2.0
29
86
0
80
39
8
15
36
1.78
5576--5643
31
2.2
31
91
0
109
22
26
16
35
1.94
13086--13111
2
13.0
2
100
0
52
50
0
0
50
1.00
16613--16644
14
2.3
14
100
0
64
6
15
28
50
1.68
16614--16664
24
2.1
24
85
0
66
11
11
21
54
1.68
17172--17237
11
5.9
11
87
3
96
30
18
25
25
1.98
17163--17236
23
3.3
23
84
7
98
29
20
25
24
1.99
17449--17499
16
3.3
15
84
10
68
11
7
17
62
1.51
24995--25025
16
1.9
16
100
0
62
12
48
25
12
1.77
26125--26177
26
2.0
26
100
0
106
41
7
22
28
1.81
38130--38285
60
2.6
60
84
2
206
32
24
4
39
1.75
38408--38551
60
2.4
61
84
4
177
38
6
24
29
1.81
39418--39479
30
2.1
30
93
0
106
54
29
8
8
1.58
39554--39607
22
2.5
22
96
0
99
40
0
7
51
1.30
40878--40905
2
14.0
2
100
0
56
50
0
0
50
1.00
44930--44989
27
2.2
27
85
8
77
46
6
1
45
1.39
47264--47345
3
27.7
3
91
2
130
35
2
0
62
1.09
48725--48765
20
2.0
20
86
13
57
39
2
0
58
1.11
49408--49432
7
3.6
7
100
0
50
68
0
0
32
0.90

Tables:   1

The End!