Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007287.1 Hibiscus syriacus cultivar Beakdansim tig00019351_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99599

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
844--880
19
2.0
18
89
5
56
35
0
0
64
0.94
2332--2390
23
2.7
22
87
7
84
25
5
13
55
1.58
3312--3363
24
2.2
24
83
13
63
46
17
11
25
1.81
13251--13389
69
2.0
69
91
2
226
35
19
20
23
1.95
15927--15980
26
2.1
26
85
0
72
55
3
5
35
1.41
16649--16692
20
2.4
18
82
14
54
61
0
0
38
0.96
17558--17618
27
2.4
26
76
15
65
31
4
3
60
1.34
18243--18286
17
2.5
17
85
10
54
75
0
4
20
0.98
19929--19955
2
13.5
2
100
0
54
51
0
0
48
1.00
21183--21455
40
6.4
40
65
22
108
24
16
32
25
1.96
21274--21415
43
3.4
44
75
16
147
25
16
32
26
1.96
21267--21610
83
4.1
83
81
0
355
25
16
31
26
1.96
21294--21601
166
1.9
166
82
1
393
25
15
33
26
1.95
21646--21830
66
2.8
67
83
2
257
39
13
22
24
1.90
21788--21851
21
3.1
21
93
2
103
43
15
20
20
1.87
21725--21917
87
2.2
88
81
8
216
38
13
23
23
1.91
22038--22166
36
3.6
35
79
11
138
37
13
17
31
1.89
22268--22331
32
2.0
32
81
0
74
28
26
15
29
1.96
26127--26153
13
2.1
13
100
0
54
22
29
33
14
1.94
26513--26556
14
3.1
14
90
3
61
43
15
6
34
1.74
28773--28813
7
5.7
7
97
2
73
58
0
41
0
0.98
33052--33107
27
2.1
27
87
9
80
46
5
3
44
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43730--43763
16
2.2
16
89
5
52
70
2
11
14
1.27
47822--47876
3
17.3
3
81
7
56
36
1
0
61
1.06
49794--49890
23
4.3
23
85
7
119
26
14
27
30
1.95
49793--49882
46
1.9
47
88
2
137
27
16
26
28
1.97
54333--54370
19
2.0
19
94
0
67
26
13
10
50
1.73
56697--56769
22
3.3
21
81
11
67
24
16
27
31
1.96
58288--58355
29
2.4
27
83
11
84
25
10
5
58
1.53
64775--64929
43
3.6
42
85
4
186
34
20
24
20
1.97
64775--64957
85
2.1
86
80
5
192
32
21
22
22
1.98
66942--67048
3
35.7
3
86
0
151
35
3
0
60
1.14
69175--69223
18
2.8
18
78
9
57
24
0
2
73
0.94
69217--69249
12
2.5
14
90
9
52
24
6
9
60
1.49
79410--79484
7
10.7
7
79
15
68
82
0
14
2
0.77
79403--79484
8
10.0
8
76
20
64
81
0
15
2
0.79
80609--81034
82
5.2
82
96
0
762
29
14
20
35
1.92
81652--82422
113
6.8
113
95
0
1276
37
14
19
28
1.91
82674--82777
3
34.7
3
88
0
154
34
3
0
61
1.14
89054--89080
13
2.1
13
100
0
54
22
33
14
29
1.94
92839--92895
21
2.9
19
79
18
64
17
28
3
50
1.62
93716--93753
20
1.9
20
89
10
60
10
13
2
73
1.19

Tables:   1

The End!