Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007291.1 Hibiscus syriacus cultivar Beakdansim tig00019377_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57484

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5902--5946
18
2.5
18
82
7
56
46
4
0
48
1.22
6942--7009
12
5.7
12
71
13
59
69
1
2
26
1.12
6979--7018
19
2.1
19
86
9
55
70
2
0
27
1.01
7630--7660
16
1.9
16
93
0
53
51
0
9
38
1.35
7753--7798
2
23.0
2
100
0
92
50
0
0
50
1.00
12112--12141
2
15.0
2
92
0
51
53
0
0
46
1.00
13056--13093
18
2.1
18
100
0
76
15
26
5
52
1.64
21903--21932
4
7.5
4
100
0
60
23
0
0
76
0.78
34513--34637
3
41.7
3
88
3
180
34
0
3
61
1.17
35021--35062
15
2.8
16
78
10
52
78
11
9
0
0.96
35860--35895
19
1.9
19
94
5
65
22
0
5
72
1.05
35863--35904
19
2.2
19
87
8
59
26
0
4
69
1.08
40363--41190
414
2.0
414
99
0
1640
35
18
19
26
1.94
44134--44195
28
2.2
28
85
8
81
74
12
12
0
1.08
45000--45048
18
2.5
20
81
18
59
28
0
4
67
1.09
47265--47297
16
2.1
16
88
5
50
39
0
0
60
0.97
52159--52885
395
1.8
395
81
4
892
39
12
11
36
1.79
56922--56953
15
2.2
15
94
5
57
59
0
6
34
1.23
56925--56965
21
2.0
21
85
4
57
60
0
7
31
1.24

Tables:   1

The End!