Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007295.1 Hibiscus syriacus cultivar Beakdansim tig00019407_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56845

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2379--2404
10
2.6
10
100
0
52
50
11
19
19
1.77
3883--3926
21
2.1
21
91
4
72
63
0
18
18
1.31
3865--3938
26
2.9
25
78
6
76
63
0
18
17
1.31
10934--10990
25
2.3
25
93
6
98
14
38
17
29
1.89
14060--14105
18
2.6
18
96
3
85
30
10
50
8
1.68
20428--20466
20
2.0
20
89
0
60
33
23
10
33
1.88
38100--38158
1
59.0
1
84
0
64
0
3
6
89
0.57
38089--38152
11
5.7
12
76
10
55
0
6
9
84
0.78
38100--38158
10
5.5
10
86
9
73
0
3
6
89
0.57
38089--38158
24
3.2
21
78
11
70
0
5
8
85
0.73
38089--38158
23
3.1
22
86
8
97
0
5
8
85
0.73
44986--45113
44
2.8
47
79
10
138
29
21
7
41
1.80
49156--49200
17
2.6
18
80
16
58
4
17
2
75
1.07
49159--49203
18
2.5
18
82
7
56
2
17
2
77
0.97
49146--49234
35
2.5
35
79
15
94
5
20
2
71
1.16
49171--49236
25
2.7
26
84
13
86
4
19
3
72
1.15
49188--49267
27
3.0
27
78
14
76
7
17
1
73
1.12
52084--52215
47
2.8
49
77
10
130
29
20
9
40
1.83

Tables:   1

The End!