Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007301.1 Hibiscus syriacus cultivar Beakdansim tig00019433_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57223

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9316--9375
21
2.9
21
76
0
75
20
38
31
10
1.85
29666--29731
26
2.5
26
95
0
123
33
25
21
19
1.97
31449--31509
32
1.9
32
100
0
122
31
14
19
34
1.92
32622--32666
2
22.5
2
100
0
90
51
0
0
48
1.00
42532--42616
29
2.9
29
87
0
134
15
34
29
21
1.94
42685--42730
14
3.3
14
87
0
74
6
28
41
23
1.79
42717--42765
10
4.6
11
78
14
50
12
28
32
26
1.92
42862--42917
29
1.9
29
92
0
94
12
41
26
19
1.87
44901--44929
9
3.2
9
100
0
58
0
10
0
89
0.48
50876--50909
13
2.5
13
95
4
59
0
23
0
76
0.79
51048--51106
28
2.1
27
81
3
64
38
10
3
47
1.54
51130--51198
30
2.3
30
95
2
122
37
15
4
42
1.68
55320--55481
81
2.0
81
83
8
206
38
11
15
34
1.83
56605--56732
29
4.5
29
84
7
165
37
12
13
36
1.82
56616--56727
56
1.9
59
87
5
167
38
11
13
36
1.81

Tables:   1

The End!