Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007304.1 Hibiscus syriacus cultivar Beakdansim tig00019450_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79031

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1269--1322
23
2.3
23
90
0
81
33
16
20
29
1.95
3251--3279
11
2.6
11
100
0
58
37
0
34
27
1.57
7411--7445
3
11.7
3
100
0
70
65
0
0
34
0.93
7653--8058
32
12.9
32
82
6
472
35
19
16
28
1.94
7653--8058
94
4.3
95
83
5
468
35
19
16
28
1.94
12024--12076
22
2.4
22
87
6
72
22
28
22
26
1.99
12402--12439
3
12.7
3
100
0
76
65
0
0
34
0.93
12665--12982
32
9.9
32
87
2
433
34
19
16
28
1.94
23599--23712
34
3.1
38
83
11
155
35
22
18
23
1.96
23858--23959
42
2.5
41
77
4
107
25
22
21
30
1.99
23908--24300
174
2.3
171
88
2
588
33
14
19
31
1.92
24259--24541
80
3.5
80
93
0
467
30
19
21
28
1.97
24510--24580
22
3.3
21
69
15
65
25
18
21
35
1.95
24502--24628
42
3.0
41
85
5
166
25
18
22
33
1.96
24928--25181
53
4.8
53
91
1
384
30
21
25
22
1.98
37605--37633
13
2.1
14
93
6
51
48
0
0
51
1.00
37615--37679
26
2.5
25
78
14
69
46
1
0
52
1.10
39863--39887
13
1.9
13
100
0
50
52
0
0
48
1.00
44004--44071
22
3.3
21
75
17
63
50
1
0
48
1.10
69356--69388
9
3.7
9
95
0
57
24
27
9
39
1.85
69387--69621
32
7.3
32
85
2
303
34
18
17
29
1.94
69387--69624
64
3.7
64
85
2
334
34
18
16
29
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69387--69623
96
2.5
96
85
0
339
35
18
16
29
1.94

Tables:   1

The End!