Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007308.1 Hibiscus syriacus cultivar Beakdansim tig00019470_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72929

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89--152
5
12.6
5
77
12
60
76
3
3
17
1.04
84--152
25
2.6
27
82
15
83
75
2
4
17
1.09
608--658
14
3.6
14
72
15
50
54
5
17
21
1.63
846--956
34
3.4
33
79
12
120
54
4
15
26
1.60
851--969
32
3.6
32
81
10
109
51
3
16
28
1.61
7864--7898
14
2.5
14
90
0
52
28
31
17
22
1.96
14817--14861
23
1.9
24
81
4
56
22
11
20
46
1.81
14847--14933
35
2.5
35
75
5
95
21
12
17
48
1.80
25195--25233
16
2.4
16
95
4
69
33
15
12
38
1.85
35501--35561
30
2.0
30
90
6
97
42
11
4
40
1.62
37956--38040
20
4.1
20
76
10
80
17
24
35
22
1.95
41846--41885
21
1.9
21
85
10
55
35
10
2
52
1.48
44104--44164
30
2.0
30
90
6
97
42
11
4
40
1.62
48416--48471
29
1.9
29
88
0
85
33
7
3
55
1.45
51671--51817
74
2.0
74
100
0
294
23
22
16
38
1.93
64967--65016
20
2.5
21
81
15
61
62
4
2
32
1.25
66368--66405
13
2.9
14
88
7
53
55
10
7
26
1.61
68322--68846
263
2.0
263
93
0
890
33
18
17
30
1.94
69292--69480
64
2.9
65
82
4
206
27
14
23
34
1.94
71989--72116
23
5.7
23
80
7
138
29
21
25
22
1.99

Tables:   1

The End!