Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007311.1 Hibiscus syriacus cultivar Beakdansim tig00019480_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85572

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1052--1079
13
2.2
13
100
0
56
71
0
0
28
0.86
1423--1448
2
13.0
2
100
0
52
50
0
0
50
1.00
2189--2223
6
6.0
6
93
6
63
17
17
17
48
1.81
2189--2223
17
2.0
18
94
5
63
17
17
17
48
1.81
2355--2400
24
1.9
24
81
0
56
60
10
15
13
1.58
4743--4771
5
6.0
5
92
8
51
82
0
17
0
0.66
13438--13587
76
2.0
76
100
0
300
38
30
8
22
1.84
20456--20551
20
4.8
20
94
0
165
27
27
8
37
1.85
21742--21772
15
2.1
15
100
0
62
32
19
12
35
1.90
24762--24809
24
2.0
23
88
11
71
22
0
2
75
0.91
27693--27811
41
2.9
42
91
1
195
24
21
23
31
1.98
29956--29999
2
22.0
2
100
0
88
50
0
0
50
1.00
32140--32181
17
2.5
17
100
0
84
33
35
0
30
1.58
34765--34789
6
4.2
6
100
0
50
52
0
16
32
1.44
39772--39801
15
2.0
15
93
0
51
26
16
13
43
1.85
46915--46956
16
2.6
16
96
0
75
47
11
11
28
1.76
54821--55060
50
4.8
50
95
1
410
25
12
16
45
1.82
58568--58623
19
2.9
19
85
12
78
16
21
28
33
1.95
58568--58616
10
4.8
11
83
16
70
16
20
26
36
1.93
58569--58623
9
5.6
10
83
12
78
14
21
29
34
1.93
58636--58666
13
2.4
13
94
0
53
16
48
19
16
1.81
58644--58684
18
2.3
18
95
0
73
17
48
21
12
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58665--58689
13
1.9
13
100
0
50
16
40
24
20
1.91
58698--58763
29
2.3
29
89
0
96
21
10
27
40
1.86
65784--65839
19
2.9
19
85
12
78
16
21
28
33
1.95
65784--65832
10
4.8
11
83
16
70
16
20
26
36
1.93
65785--65839
9
5.6
10
83
12
78
14
21
29
34
1.93
65851--65881
13
2.4
13
94
0
53
16
48
19
16
1.81
65859--65899
18
2.3
18
95
0
73
17
48
21
12
1.79
65880--65904
13
1.9
13
100
0
50
16
40
24
20
1.91
65913--65978
29
2.3
29
89
0
96
21
10
27
40
1.86
67776--67815
20
2.0
20
90
0
62
25
10
10
55
1.64
68599--68637
15
2.4
17
87
12
55
28
15
5
51
1.64
71749--71903
77
2.0
77
84
2
204
27
16
10
45
1.80
72471--72600
69
1.9
69
83
3
172
38
4
5
51
1.45
72715--72791
37
2.2
36
82
11
97
45
2
3
48
1.34
72767--72930
72
2.3
69
80
15
178
54
4
3
37
1.38
74537--74605
24
2.8
25
82
14
81
49
1
44
4
1.31
82002--82034
7
4.7
7
92
0
57
18
0
36
45
1.49

Tables:   1

The End!