Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007312.1 Hibiscus syriacus cultivar Beakdansim tig00019481_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59573

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3713--4161
221
2.0
219
86
7
633
28
12
19
40
1.88
4568--4614
18
2.7
18
90
3
69
27
29
8
34
1.87
4785--4897
60
1.9
60
84
0
154
35
16
2
45
1.62
8968--9214
59
4.2
59
72
11
188
34
12
23
29
1.92
8875--9121
116
2.1
115
81
5
275
36
11
23
29
1.89
17509--17654
36
4.1
36
94
1
249
15
24
11
48
1.78
21027--21062
16
2.2
16
95
0
63
27
30
22
19
1.98
25317--25349
6
5.5
6
89
10
50
81
3
0
15
0.80
25317--25349
11
2.8
12
86
13
50
81
3
0
15
0.80
25316--25349
17
1.9
18
94
5
61
79
2
0
17
0.86
26495--26546
10
5.2
10
78
15
54
53
0
5
40
1.25
26506--26543
13
2.7
15
88
12
62
52
0
5
42
1.24
26644--26698
25
2.3
24
82
17
62
56
7
0
36
1.27
26644--26698
27
2.1
25
83
6
65
56
7
0
36
1.27
28224--28262
16
2.5
15
84
8
51
35
2
23
38
1.68
28343--28406
23
2.8
23
95
0
110
25
23
17
34
1.96
28550--28580
2
15.5
2
100
0
62
48
0
0
51
1.00
42194--42304
39
2.8
39
90
0
159
36
20
19
22
1.95
43166--43230
30
2.3
29
82
10
82
49
4
0
46
1.22
43446--43508
33
2.0
32
93
6
110
44
3
0
52
1.17
46330--46418
27
3.3
27
96
0
160
40
3
15
40
1.64
56406--56463
24
2.3
26
85
5
75
65
3
0
31
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56645--56692
25
1.9
25
82
0
60
29
18
20
31
1.97
57788--57833
14
3.4
14
82
17
53
41
0
0
58
0.98

Tables:   1

The End!