Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007314.1 Hibiscus syriacus cultivar Beakdansim tig00019484_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56267

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2384--2437
23
2.4
23
84
6
67
35
16
24
24
1.95
8179--8360
73
2.5
74
85
4
253
23
19
26
30
1.98
12249--12289
21
2.0
20
95
4
73
31
4
24
39
1.76
12468--12510
23
1.9
22
85
4
59
41
0
16
41
1.48
14802--15293
131
3.8
130
80
5
508
32
16
20
31
1.95
14802--15256
130
3.5
130
80
5
499
32
16
20
29
1.95
16609--16672
1
64.0
1
77
0
65
4
1
4
89
0.66
16594--16664
7
10.4
7
83
10
69
8
1
4
85
0.77
16594--16665
8
9.4
8
85
8
71
8
1
4
86
0.76
16637--16694
23
2.5
23
82
2
62
8
10
0
81
0.89
16659--16738
23
3.7
22
73
20
64
3
21
0
75
0.96
16678--16735
28
2.1
28
83
6
73
1
24
0
74
0.92
16645--16738
41
2.3
39
79
15
102
5
18
0
76
0.97
19755--20914
6
195.7
6
96
3
2190
50
16
0
33
1.46
24789--24835
20
2.4
20
86
10
62
31
12
4
51
1.59
27632--27675
18
2.4
18
84
3
61
63
6
11
18
1.48
30915--30941
14
1.9
14
100
0
54
44
0
3
51
1.19
33749--33787
21
1.9
20
94
5
69
30
5
23
41
1.76
34075--34235
81
1.9
83
86
6
227
27
12
21
38
1.89
38534--38569
16
2.2
17
90
5
56
36
0
0
63
0.94
55033--55083
20
2.5
20
90
0
75
25
25
19
29
1.99

Tables:   1

The End!