Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007315.1 Hibiscus syriacus cultivar Beakdansim tig00019512_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44831

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6274--6316
19
2.3
19
100
0
86
32
18
23
25
1.97
6274--6328
19
2.9
19
88
0
56
30
16
27
25
1.96
11067--11095
9
3.2
9
100
0
58
0
0
65
34
0.93
11094--11391
9
32.3
9
83
7
339
27
1
35
35
1.66
8553--11391
6
470.5
6
86
2
1864
20
1
43
34
1.62
12928--12953
13
2.0
13
100
0
52
15
15
15
53
1.73
13807--13884
29
2.7
28
88
7
111
32
7
6
53
1.55
15172--15234
31
2.0
31
100
0
126
34
34
3
26
1.73
26893--26945
27
2.0
27
85
7
72
15
5
16
62
1.51
29584--29653
21
3.3
21
82
4
79
25
5
14
54
1.62
29879--29973
44
2.2
46
79
12
110
33
17
18
29
1.95
32453--32564
21
5.4
21
64
19
74
17
21
23
37
1.94
32433--32587
41
3.8
41
93
0
274
15
21
23
39
1.92
32515--32584
20
3.5
20
70
18
72
12
22
24
40
1.89
32670--32717
6
8.5
6
97
2
75
29
54
16
0
1.43
33535--33648
20
5.6
20
66
19
74
40
25
21
12
1.88
33555--33625
21
3.4
21
70
18
76
38
26
19
15
1.92
33639--33689
21
2.4
21
96
0
93
27
33
17
21
1.96
33532--33645
41
2.8
41
95
0
210
40
25
21
13
1.89
37050--37497
206
2.2
206
82
4
548
24
16
27
32
1.96
37753--37782
3
10.0
3
100
0
60
66
0
0
33
0.92
39178--39217
19
2.1
19
90
0
62
2
12
7
77
1.07

Tables:   1

The End!