Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007322.1 Hibiscus syriacus cultivar Beakdansim tig00019542_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31018

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
910--981
15
4.8
16
71
19
57
13
23
0
62
1.31
6076--6121
21
2.2
21
96
0
83
28
36
4
30
1.76
6456--6482
13
2.1
13
100
0
54
14
7
14
62
1.51
9003--9036
12
2.9
12
91
4
52
26
35
0
38
1.57
10437--10487
19
2.6
20
87
3
68
45
5
11
37
1.65
12155--12195
22
1.9
21
85
5
55
26
2
34
36
1.70
13979--14046
26
2.6
26
90
0
100
19
33
17
29
1.95
15239--15281
15
2.8
16
80
16
54
55
4
6
32
1.47
21651--21685
16
2.1
17
89
5
54
68
0
14
17
1.21
21879--21920
7
5.9
7
83
13
50
0
14
2
83
0.75
21881--21920
21
2.0
21
90
5
64
0
12
2
85
0.71
21881--21919
10
3.7
11
83
10
55
0
12
2
84
0.72
22310--22345
14
2.6
14
95
4
65
30
0
44
25
1.54
22310--22348
13
2.9
13
88
7
60
35
0
41
23
1.55
23964--24375
221
1.9
221
88
1
619
39
19
15
25
1.91
27438--27489
14
3.8
14
89
2
70
34
1
40
23
1.66
27447--27496
14
3.6
14
91
0
64
36
4
38
22
1.73

Tables:   1

The End!