Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007325.1 Hibiscus syriacus cultivar Beakdansim tig00019546_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95109

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20100--20155
28
2.0
28
96
0
103
48
17
12
21
1.80
23209--23329
46
2.6
46
84
5
156
32
2
14
51
1.55
29571--29614
22
2.0
22
86
0
61
59
2
4
34
1.30
32901--32937
19
1.9
19
89
10
58
70
2
8
18
1.25
33879--33940
26
2.4
26
75
5
63
59
3
3
33
1.29
37735--37767
14
2.3
15
94
5
59
54
6
24
15
1.63
47712--47754
2
21.5
2
100
0
86
51
0
0
48
1.00
52823--52860
6
6.0
6
90
9
58
5
0
47
47
1.24
58153--58719
171
3.3
170
83
2
667
33
11
12
42
1.78
61547--61628
27
3.3
27
67
19
86
24
26
9
39
1.86
61533--61629
48
2.0
48
100
0
194
22
26
12
38
1.90
63744--63801
29
2.0
29
89
0
89
32
17
10
39
1.83
69002--69026
12
2.1
12
100
0
50
32
40
0
28
1.57
72830--72867
20
1.9
20
88
0
58
31
26
23
18
1.97
74888--75030
32
4.5
32
85
1
137
18
25
27
28
1.98
74890--75030
64
2.2
64
85
2
185
18
24
28
29
1.98
85403--85470
19
3.5
19
80
7
91
19
22
22
36
1.95
85384--85554
40
4.5
40
81
16
220
21
21
22
35
1.96
85377--85471
21
4.7
21
76
7
99
21
22
22
34
1.97
85448--85505
29
2.0
29
96
0
107
24
20
18
36
1.95
85491--85554
21
3.0
21
70
17
69
20
20
26
32
1.97
85408--85547
69
2.0
71
94
2
248
22
20
21
35
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85635--85659
6
4.2
6
100
0
50
36
32
0
32
1.58
86168--86192
6
4.2
6
100
0
50
0
16
52
32
1.44
86317--86425
21
5.2
21
75
16
109
34
25
20
19
1.96
86287--86448
42
3.9
42
92
1
265
36
21
20
21
1.95
89943--89981
16
2.4
16
95
0
69
23
7
17
51
1.71
94174--94266
21
4.5
21
75
4
91
40
18
23
17
1.90
94174--94266
41
2.3
41
96
0
177
40
18
23
17
1.90
94193--94327
41
3.3
41
81
6
123
39
20
20
19
1.93
94255--94345
20
4.5
20
79
2
83
34
25
17
23
1.96
94537--94580
22
2.0
22
95
0
79
20
45
15
18
1.85
94857--94899
20
2.2
20
91
0
68
11
18
16
53
1.72

Tables:   1

The End!