Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007326.1 Hibiscus syriacus cultivar Beakdansim tig00019571_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55923

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9473--9525
26
2.0
26
100
0
106
15
32
11
41
1.82
15476--15516
2
21.0
2
90
5
66
51
0
2
46
1.14
16664--16776
60
1.9
59
81
1
136
35
21
2
40
1.67
16922--17045
60
2.1
60
84
6
162
40
4
22
32
1.75
16942--17058
60
1.9
61
84
5
157
41
5
22
30
1.75
18203--18232
14
2.1
14
93
0
51
50
23
0
26
1.50
20769--20844
37
2.1
37
100
0
152
35
15
10
38
1.82
21357--21386
15
2.0
15
100
0
60
53
33
0
13
1.40
27287--27352
3
22.0
3
76
11
64
37
0
28
33
1.58
29248--29396
72
2.1
72
100
0
298
31
10
16
40
1.83
31658--31791
60
2.2
59
83
7
155
32
17
20
29
1.96
31658--31770
60
1.9
60
86
0
163
34
17
17
30
1.94
36664--36721
29
2.1
28
81
15
68
44
13
17
24
1.85
36793--36877
24
3.5
24
87
6
116
31
17
15
35
1.91
36861--36934
17
4.0
17
76
19
76
32
12
12
43
1.79
36837--36934
40
2.4
41
88
5
146
32
13
13
40
1.83
46117--46147
13
2.4
13
100
0
62
25
12
9
51
1.70
47177--47202
11
2.4
11
100
0
52
15
0
0
84
0.62
47302--47340
21
1.9
21
84
5
53
7
7
7
76
1.15
48064--48101
20
1.9
20
88
0
58
50
23
0
26
1.50
48100--48136
14
2.6
14
91
0
56
32
43
0
24
1.55
49530--49584
26
2.1
27
82
3
67
36
0
0
63
0.95

Tables:   1

The End!